PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009786377.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 354aa    MW: 40155.8 Da    PI: 7.3584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009786377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-18145194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+g
  XP_009786377.1 145 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAEAAAYAYDRAAYKLRG 194
                     59******9.**********954...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.39E-15144203No hitNo description
SMARTSM003804.3E-34145208IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-30145203IPR001471AP2/ERF domain
PROSITE profilePS5103223.143145202IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-22145202IPR016177DNA-binding domain
PfamPF008472.5E-12146194IPR001471AP2/ERF domain
PRINTSPR003676.4E-10146157IPR001471AP2/ERF domain
PRINTSPR003676.4E-10168184IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MRKIQETMSY TYDEAAQIRS SLSQILLTSS TNTLDSIFSH CQQQQTTTIT SQSQTIFSDC  60
QESNNQMATK NVFEPLGSSV YNNNNYALVP DNLGSSVYLR QKDLLQKFWE ENRTNVTIPT  120
TSTQTPHQNT SLYSKNYVCP SKKKLYRGVR QRHWGKWVAE IRLPQNRMRV WLGTYETAEA  180
AAYAYDRAAY KLRGDYARLN FPNIRDDTSK LGFGDSTTMN AVKSSVDAKI QAICQKVKRE  240
RAKKGAKKIV ESDKKVEKNV DLDSSSCSSS IVCNESWSNS DVISQSSTED GLWKSENSPC  300
SVLDDPYVGP KNDDHITSIT HQFEKPMMEL EFEDCSLARV PSFDPELIWS ILAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-22141202163ATERF1
2gcc_A2e-22141202163ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009786377.10.0PREDICTED: ethylene-responsive transcription factor ERF061-like
TrEMBLM1A5621e-142M1A562_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000149531e-142(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.15e-58ERF family protein